SIMAP Project

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Gavin Shaw
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Post by Gavin Shaw » Thu Oct 01, 2009 1:43 am

Just a heads up.

SIMAP has started releasing workunits for the October run. Come and get them.

I have one machine donating 50% of its CPU to SIMAP for this month. I am mainly focusing on WCG at the moment...
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Post by Bird-Dog » Sun Nov 01, 2009 4:44 pm

Bigger than usual run this month, should be up to three weeks work.
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Gavin Shaw
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Post by Gavin Shaw » Sun Nov 01, 2009 11:06 pm

1st / 2nd Nov 2009:

SIMAP has released work.

The current workunits calculate the similarities and domains of approx. 400.000 new sequences from public databases and approx. 5 million new sequences from environmental samples imported in October 2009. After these calculations are finished, next workunits are expected around December 1st.

Also more SIMAP news:

Server downtime: a harddrive error occured on the database server. We have repaired the filesystem and the database, but had to restore the host table from backup due to corruption. Therefore all hosts having registered since Oct 31 00.05 a.m. are asked to re-register. We are sorry for this.
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Buga1
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Post by Buga1 » Sat Nov 07, 2009 9:25 pm

Wow. They still have work? I forgot all about it, again. LOL

Will go see if I can get some.

Rick
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sdl735
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Simap work units

Post by sdl735 » Wed Dec 02, 2009 12:37 am

Less than 12000 work units left .get them quick if you want them . I've been running straight thru from the Nov. start , this has been my best run yet :smt020
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Re: SIMAP Project

Post by AC » Mon Feb 01, 2010 5:34 am

They have work available now :smt001

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Re: SIMAP Project

Post by AC » Sat Feb 06, 2010 11:17 pm

We're slowly creeping back up now.

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Re: SIMAP Project

Post by Buga1 » Sat Feb 06, 2010 11:19 pm

Hopefully I can get the duals going again and give one of them to simap.

Still de-Bugaing. LOL

Rick
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Re: SIMAP Project

Post by AC » Sun Feb 07, 2010 7:52 pm

Great Buga. :smt023

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sdl735
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Re: SIMAP Project

Post by sdl735 » Wed Mar 31, 2010 1:36 pm

Work Units Avalible Now....Come and Get Some
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Gavin Shaw
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Re: SIMAP Project

Post by Gavin Shaw » Thu Apr 01, 2010 12:39 am

On it...
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Re: SIMAP Project

Post by AC » Thu Apr 08, 2010 10:08 pm

Also on it.

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Re: SIMAP Project

Post by Buga1 » Sat Apr 10, 2010 10:14 pm

Got some, but looks like the have run dry now.

Rick
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sdl735
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Re: SIMAP Project

Post by sdl735 » Sat May 01, 2010 1:38 am

It's that time again Folks Come and get 'em
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Gavin Shaw
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Re: SIMAP Project

Post by Gavin Shaw » Sat May 01, 2010 2:11 am

30 Apr 2010:

New Workunits: the calculation of similarities and features of approx. 250,000 new sequences, that were imported from protein databases and metagenomes into SIMAP until the end of April, will start in the evening (UTC) of April 30.
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Re: SIMAP Project

Post by sdl735 » Mon May 31, 2010 3:35 pm

Calculation of SIMAP updates is starting soon.
The calculation of new simap workunits containing new sequences from public databases imported in May 2010 (simap app) and their domains (hmmer app) will start in the evening (UTC) of June 1st.
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Gavin Shaw
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Re: SIMAP Project

Post by Gavin Shaw » Wed Jun 02, 2010 2:20 am

SIMAP units for June 2010 are now available.

Come and get them!!!
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Re: SIMAP Project

Post by sdl735 » Thu Jul 01, 2010 12:32 am

The calculation of new simap workunits containing new sequences from public databases imported in June 2010 (simap app) and their domains (hmmer app) will start in the evening (UTC) of July 1st.
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Gavin Shaw
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Re: SIMAP Project

Post by Gavin Shaw » Thu Jul 22, 2010 3:27 am

21 Jul 2010:

The main power cable has been damaged due to construction work around our building. This caused a power outage of several hours. Power has been restored and the servers are now running again.

Sorry for the interruption, best regards,
Thomas
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Re: SIMAP Project

Post by Gavin Shaw » Sun Aug 01, 2010 1:05 am

SIMAP workunits are still available.
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Gavin Shaw
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Re: SIMAP Project

Post by Gavin Shaw » Wed Aug 18, 2010 10:22 pm

18 Aug 2010:

Since today afternoon we are distributing the last series of workunits containing new environmental sequences from CAMERA metagenomes. Probably these will need until the end of August to be calculated, so we will just continue after them with the regular workunits of September.

Thanks to all of you for crunching this large update!
Best,
Thomas
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Re: SIMAP Project

Post by sdl735 » Thu Jun 02, 2011 1:35 am

Come and Get 'em Work Units available now
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Re: SIMAP Project

Post by danielmid » Thu Jun 02, 2011 8:13 am

Loading up now!
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